CDS

Accession Number TCMCG007C45148
gbkey CDS
Protein Id XP_009105314.1
Location complement(join(23693578..23693799,23693885..23694056,23694141..23694324,23694409..23695942))
Gene LOC103831194
GeneID 103831194
Organism Brassica rapa

Protein

Length 703aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009107066.3
Definition ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description PSII associated light-harvesting complex II catabolic process
KEGG_TC -
KEGG_Module M00742        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K03798        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004176        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008237        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009644        [VIEW IN EMBL-EBI]
GO:0009765        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010109        [VIEW IN EMBL-EBI]
GO:0010205        [VIEW IN EMBL-EBI]
GO:0010206        [VIEW IN EMBL-EBI]
GO:0010304        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019684        [VIEW IN EMBL-EBI]
GO:0030091        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031977        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042548        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043155        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043467        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1905156        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCTCAACCTCGTTACGCTCCTCACTCTTCTTCGGATCCAACGTCATAATCTCATCCCCCACTCCCAAAACCACAAAACCCTCCTTCCACATCACTCGATCCTCTGTCGATGACAAACCCTTAAAGTCCCTCCCTTCACGAGCCGCCTTAGCAGCTATCCTCTTCTCATCATCAATCTCCTCCCAATCCCCAAAGGCCCTAGCTTTAGACCAGCCCCTTACCCCCACCCAACCCATCGTCATCGAAGCTCAATCACTCTCCCCCTCTCCCTCATCTCTCTCCCCCTTTGCTCAAAGCCAAGTGATTACAGCTCCCAACCCGAAAGCCCAATCATCATCCTCGGATCTCCCCGATGGATCTCAGTGGCGGTACAGCGAGTTCCTCAACGCGGTTAAGAAGGGTAAAGTCGAGAGAGTCAGATTCAGCAAAGACGGCTCCGTTCTCCAGCTCACCGCCGTCGATAACCGCCGCGCCTCCGTCGTGGTCCCCAACGACCCCGATCTCATCGATATCTTGGCCATGAACGGCGTCGACATCTCCGTCTCCGAGGGGGAGTCCGGTAACGATCTCTTCACCATCATCGGGAACTTGATTTTCCCGATCTTGGCTTTTGGTGGGCTTTTTTTACTATTCAGGAGAGCTGGAGGTGGGCCTGGTGGGCCTGGAGGGTTAGGTGGGCCGATGGATTTCGGAAGGTCCAAATCCAAGTTTCAGGAAGTTCCCGAGACAGGTGTCTCATTCGCTGACGTGGCTGGAGCTGACCAGGCGAAGCTTGAGCTGCAAGAAGTCGTCGACTTTTTGAAGAATCCGGATAAGTACACTGCCTTGGGCGCCAAGATTCCCAAAGGTTGTCTCCTCGTGGGTCCCCCCGGGACTGGTAAGACTCTTTTAGCTAGAGCTGTGGCTGGAGAGGCTGGAGTGCCGTTCTTCTCCTGCGCGGCGTCTGAGTTTGTTGAGCTTTTCGTTGGTGTGGGTGCCTCTAGGGTTAGGGATTTGTTTGAGAAGGCGAAGGCTAAGGCGCCTTGTATTGTTTTTATCGATGAGATTGATGCTGTGGGGAGGCAGAGAGGAGCTGGGATGGGAGGAGGGAATGATGAGAGGGAGCAGACGATTAATCAGTTGCTGACTGAGATGGATGGGTTTAGTGGTAACTCTGGTGTGATTGTTTTGGCTGCTACGAATAGGCCTGATGTGCTTGACTCTGCGTTGTTGAGGCCTGGGAGGTTTGATAGGCAGGTGACGGTTGATAGGCCTGATGTTGCTGGGAGAGTTAAGATTCTTCAGGTTCATTCTAGAGGGAAGGCGATTGGGAAAGATGTGGACTTTGATAAGGTTGCGAGGAGGACGCCTGGTTTCACTGGTGCTGATTTGCAGAACTTGATGAATGAGGCGGCGATTCTTGCGGCGAGGCGGGAGCTTAAGGAGATAAGCAAGGATGAGATCTCTGATGCTCTTGAGAGGATCATTGCTGGACCTGAGAAGAAGAATGCTGTTGTCTCTGATGAGAAGAAGAGGCTTGTTGCTTACCATGAGGCTGGTCATGCTTTAGTCGGTGCTCTTATGCCGGAGTATGATCCTGTTGCTAAGATTTCAATCATTCCTCGTGGTCAAGCTGGTGGGCTTACCTTCTTTGCTCCCAGTGAAGAGAGACTAGAGTCTGGTCTGTACAGTAGAAGCTACCTCGAGAATCAAATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAGGAGGTGATCTTTGGTGATGACAATGTGACGACTGGAGCATCAAATGATTTCATGCAGGTGTCTCGTGTGGCACGTCAGATGATAGAGAGGTTCGGGTTCAGCAAAAAGATTGGACAAGTTGCCGTTGGTGGCCCTGGTGGAAACCCCTTCATGGGTCAACAAATGTCTTCACAGAAAGACTACTCAATGGCAACTGCTGATATCGTAGATGCTGAGGTGAGAGAGCTGGTGGAGAAGGCGTACAAGAGAGCCACGGACATCATCACAACTCACATTGATATCCTACACAAGCTTGCGCAGCTCTTGATCGAGAAAGAAACTGTTGATGGAGAAGAGTTCATGAGTCTCTTTATTGACGGCCAAGCTGAGTTGTATGTTTCTTAA
Protein:  
MASTSLRSSLFFGSNVIISSPTPKTTKPSFHITRSSVDDKPLKSLPSRAALAAILFSSSISSQSPKALALDQPLTPTQPIVIEAQSLSPSPSSLSPFAQSQVITAPNPKAQSSSSDLPDGSQWRYSEFLNAVKKGKVERVRFSKDGSVLQLTAVDNRRASVVVPNDPDLIDILAMNGVDISVSEGESGNDLFTIIGNLIFPILAFGGLFLLFRRAGGGPGGPGGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKAIGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSDEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDDNVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATDIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS